Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 AL671277.1-201ENST00000429656 993 ntBASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 AL450472.2-201ENST00000603663 1156 ntBASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN4Q9NQP4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 AC087386.2-201ENST00000623212 4637 ntBASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 AL139010.1-201ENST00000454878 894 ntBASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 RNA5SP410-201ENST00000516285 106 ntBASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 AC099522.2-201ENST00000607001 744 ntBASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 AC008267.7-201ENST00000624570 1194 ntBASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 LINC01101-201ENST00000622953 1884 ntBASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 C18orf15-201ENST00000623680 2534 ntBASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN4Q9NQP4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN4Q9NQP4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms