Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 TREML5P-201ENST00000421694 576 ntBASIC14.87□□□□□ -0.03
BRF2Q9HAW0 AC241585.1-201ENST00000433527 519 ntBASIC14.87□□□□□ -0.03
BRF2Q9HAW0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 AC114501.2-201ENST00000439631 535 ntBASIC14.87□□□□□ -0.03
BRF2Q9HAW0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 TIMM17BP1-201ENST00000545713 516 ntBASIC14.87□□□□□ -0.03
BRF2Q9HAW0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 AC013726.1-201ENST00000563747 2285 ntBASIC14.86□□□□□ -0.03
BRF2Q9HAW0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 MIR943-201ENST00000401286 94 ntBASIC14.86□□□□□ -0.03
BRF2Q9HAW0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 FAM8A3P-201ENST00000427218 844 ntBASIC14.86□□□□□ -0.03
BRF2Q9HAW0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 AC139530.3-201ENST00000620344 690 ntBASIC14.86□□□□□ -0.03
BRF2Q9HAW0 AC004461.2-201ENST00000629517 803 ntBASIC14.86□□□□□ -0.03
BRF2Q9HAW0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 KRT18P28-201ENST00000453838 1332 ntBASIC14.86□□□□□ -0.03
BRF2Q9HAW0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
BRF2Q9HAW0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
BRF2Q9HAW0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms