Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 AC104457.1-201ENST00000401024 814 ntBASIC18.26■□□□□ 0.51
RNF41Q9H4P4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 GHSR-202ENST00000427970 912 ntBASIC18.26■□□□□ 0.51
RNF41Q9H4P4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 CR383656.12-201ENST00000549567 513 ntBASIC18.26■□□□□ 0.51
RNF41Q9H4P4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 KRT8P44-201ENST00000441609 1350 ntBASIC18.26■□□□□ 0.51
RNF41Q9H4P4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF41Q9H4P4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 SAMD11P1-201ENST00000571429 661 ntBASIC18.25■□□□□ 0.51
RNF41Q9H4P4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.25■□□□□ 0.51
RNF41Q9H4P4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF41Q9H4P4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 INE1-201ENST00000456273 945 ntBASIC18.24■□□□□ 0.51
RNF41Q9H4P4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.24■□□□□ 0.51
RNF41Q9H4P4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms