Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 WASH3P-207ENST00000560956 1394 ntBASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 FO538757.1-201ENST00000623083 1397 ntBASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 LINC00528-201ENST00000600723 2160 ntBASIC13.81□□□□□ -0.2
COMMD4Q9H0A8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 AC023908.3-201ENST00000564211 3047 ntBASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 AC026748.1-201ENST00000624349 3251 ntBASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 AC007967.2-201ENST00000432613 625 ntBASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 EEF1DP4-201ENST00000446006 880 ntBASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 RN7SL589P-201ENST00000481268 310 ntBASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 FAM86C2P-203ENST00000528684 1004 ntBASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 AL135744.1-201ENST00000565098 629 ntBASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.8□□□□□ -0.2
COMMD4Q9H0A8 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 TFAMP1-201ENST00000412727 736 ntBASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 AC142381.1-201ENST00000426099 345 ntBASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 RPL13AP23-201ENST00000480739 586 ntBASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.79□□□□□ -0.2
COMMD4Q9H0A8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms