Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AL645929.1-201ENST00000420084 975 ntBASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AC010203.1-204ENST00000548782 407 ntBASIC12.66□□□□□ -0.38
NKX6-2Q9C056 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AC010331.1-201ENST00000611423 582 ntBASIC12.66□□□□□ -0.38
NKX6-2Q9C056 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AP000867.4-201ENST00000641616 219 ntBASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AC023024.2-201ENST00000623561 1993 ntBASIC12.66□□□□□ -0.38
NKX6-2Q9C056 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AL592424.1-201ENST00000563624 1536 ntBASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AC004899.2-201ENST00000622993 3860 ntBASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 INTS4P1-201ENST00000438455 1935 ntBASIC12.66□□□□□ -0.38
NKX6-2Q9C056 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NKX6-2Q9C056 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 AC131009.4-201ENST00000624048 1740 ntBASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 AC113367.3-201ENST00000508316 1912 ntBASIC12.65□□□□□ -0.38
NKX6-2Q9C056 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 AC092647.4-201ENST00000457211 535 ntBASIC12.65□□□□□ -0.38
NKX6-2Q9C056 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms