Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 AC136604.1-201ENST00000418535 575 ntBASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 RNA5SP410-201ENST00000516285 106 ntBASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 HNRNPUP1-201ENST00000554987 333 ntBASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 AC026979.3-201ENST00000607315 403 ntBASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXP3Q9BZS1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 MIR661-201ENST00000384842 89 ntBASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 AC142381.1-201ENST00000426099 345 ntBASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 AC002472.2-201ENST00000442739 958 ntBASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 ALG1L8P-201ENST00000533887 760 ntBASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 AC190387.1-201ENST00000551683 408 ntBASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 RN7SL204P-201ENST00000582831 262 ntBASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 AC026748.1-201ENST00000624349 3251 ntBASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXP3Q9BZS1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms