Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.67■□□□□ 0.1
NDNQ99608 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.67■□□□□ 0.1
NDNQ99608 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.67■□□□□ 0.1
NDNQ99608 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDNQ99608 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDNQ99608 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.67■□□□□ 0.1
NDNQ99608 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NDNQ99608 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.67■□□□□ 0.1
NDNQ99608 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDNQ99608 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NDNQ99608 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NDNQ99608 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.67■□□□□ 0.1
NDNQ99608 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NDNQ99608 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDNQ99608 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.67■□□□□ 0.1
NDNQ99608 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDNQ99608 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDNQ99608 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
NDNQ99608 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.67■□□□□ 0.1
NDNQ99608 AL359183.1-201ENST00000623796 2132 ntBASIC15.67■□□□□ 0.1
NDNQ99608 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NDNQ99608 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDNQ99608 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 AC007191.1-201ENST00000623179 2995 ntBASIC15.66■□□□□ 0.1
NDNQ99608 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.66■□□□□ 0.1
NDNQ99608 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
NDNQ99608 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.66■□□□□ 0.1
NDNQ99608 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 AC254562.1-201ENST00000417586 456 ntBASIC15.66■□□□□ 0.1
NDNQ99608 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.66■□□□□ 0.1
NDNQ99608 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.66■□□□□ 0.1
NDNQ99608 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 SNHG9-202ENST00000564014 471 ntBASIC15.66■□□□□ 0.1
NDNQ99608 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.66■□□□□ 0.1
NDNQ99608 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NDNQ99608 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.66■□□□□ 0.1
NDNQ99608 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.66■□□□□ 0.1
NDNQ99608 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.66■□□□□ 0.1
NDNQ99608 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.66■□□□□ 0.1
NDNQ99608 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NDNQ99608 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NDNQ99608 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
NDNQ99608 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.66■□□□□ 0.1
NDNQ99608 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NDNQ99608 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NDNQ99608 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NDNQ99608 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDNQ99608 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDNQ99608 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDNQ99608 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.65■□□□□ 0.1
NDNQ99608 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
NDNQ99608 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NDNQ99608 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDNQ99608 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NDNQ99608 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NDNQ99608 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDNQ99608 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.65■□□□□ 0.1
NDNQ99608 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
NDNQ99608 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NDNQ99608 SPDYE17-201ENST00000412399 783 ntBASIC15.65■□□□□ 0.1
NDNQ99608 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.65■□□□□ 0.1
NDNQ99608 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.65■□□□□ 0.1
NDNQ99608 AP006288.1-201ENST00000446065 395 ntBASIC15.65■□□□□ 0.1
NDNQ99608 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.65■□□□□ 0.1
NDNQ99608 AC004967.1-201ENST00000453589 447 ntBASIC15.65■□□□□ 0.1
NDNQ99608 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.65■□□□□ 0.1
NDNQ99608 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.65■□□□□ 0.1
NDNQ99608 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms