Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 LTB4R2-202ENST00000528054 3092 ntBASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 OR6D1P-202ENST00000641007 5290 ntBASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 AL627231.1-201ENST00000394467 1125 ntBASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 AL132994.2-201ENST00000603120 687 ntBASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 MIR6756-201ENST00000616240 63 ntBASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 NAP1L6-202ENST00000641404 1222 ntBASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 FKBP4P6-201ENST00000457486 1332 ntBASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM43Q96BQ3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 AC234644.1-201ENST00000406065 370 ntBASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 RCC2P8-201ENST00000502779 1035 ntBASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 CTBP2P4-201ENST00000513884 920 ntBASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 SAMD11P1-201ENST00000571429 661 ntBASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 AC007718.1-201ENST00000621078 280 ntBASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 AC051619.9-201ENST00000623237 597 ntBASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 AP000593.2-201ENST00000542775 1433 ntBASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM43Q96BQ3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms