Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MBD3L1Q8WWY6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 PTENP1-202ENST00000532280 3996 ntBASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 AC138969.3-201ENST00000546612 1459 ntBASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 AC138932.2-201ENST00000548268 1459 ntBASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 AC126755.4-201ENST00000549796 1459 ntBASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 TPT1P11-201ENST00000458482 498 ntBASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 MTDHP3-201ENST00000594186 672 ntBASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 PPT1-213ENST00000641319 2388 ntBASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 AC099521.3-201ENST00000624251 2938 ntBASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
MBD3L1Q8WWY6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
MBD3L1Q8WWY6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms