Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LINC01115-203ENST00000606068 577 ntBASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 AF228730.6-201ENST00000641497 218 ntBASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 AC084121.3-201ENST00000641716 218 ntBASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.2■□□□□ 0.5
SMARCC2Q8TAQ2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 CRB3P1-201ENST00000449338 276 ntBASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMARCC2Q8TAQ2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 AC015922.1-201ENST00000421102 1152 ntBASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 AL589987.1-201ENST00000453380 819 ntBASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 TPRX2P-201ENST00000535362 881 ntBASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 CICP11-201ENST00000434745 2827 ntBASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMARCC2Q8TAQ2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SMARCC2Q8TAQ2 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms