Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.66■□□□□ 0.26
BEST2Q8NFU1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 USP32P1-208ENST00000506594 1164 ntBASIC16.66■□□□□ 0.26
BEST2Q8NFU1 AC068587.3-201ENST00000526613 355 ntBASIC16.66■□□□□ 0.26
BEST2Q8NFU1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 BTNL10-201ENST00000595971 695 ntBASIC16.66■□□□□ 0.26
BEST2Q8NFU1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 BX539320.1-201ENST00000623759 877 ntBASIC16.66■□□□□ 0.26
BEST2Q8NFU1 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 AL645728.2-202ENST00000641679 227 ntBASIC16.66■□□□□ 0.26
BEST2Q8NFU1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST2Q8NFU1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AC020658.6-201ENST00000623564 1870 ntBASIC16.65■□□□□ 0.26
BEST2Q8NFU1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 ACKR1-201ENST00000368121 1240 ntBASIC16.65■□□□□ 0.26
BEST2Q8NFU1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AC007274.1-201ENST00000439805 662 ntBASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AC093433.1-201ENST00000458048 571 ntBASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AC004066.1-201ENST00000502488 802 ntBASIC16.65■□□□□ 0.26
BEST2Q8NFU1 SLC25A47P1-201ENST00000531577 414 ntBASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AC233724.13-201ENST00000598383 410 ntBASIC16.65■□□□□ 0.26
BEST2Q8NFU1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AC017083.2-201ENST00000608069 979 ntBASIC16.65■□□□□ 0.26
BEST2Q8NFU1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BEST2Q8NFU1 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms