Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
CPEB3Q8NE35 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.64□□□□□ -0.23
CPEB3Q8NE35 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 AC092364.2-202ENST00000597012 1073 ntBASIC13.64□□□□□ -0.23
CPEB3Q8NE35 SRD5A3P1-201ENST00000603021 949 ntBASIC13.64□□□□□ -0.23
CPEB3Q8NE35 AC004790.1-201ENST00000612686 536 ntBASIC13.64□□□□□ -0.23
CPEB3Q8NE35 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CPEB3Q8NE35 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 AC126177.1-201ENST00000547829 2218 ntBASIC13.63□□□□□ -0.23
CPEB3Q8NE35 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 HMGN1P19-201ENST00000436976 333 ntBASIC13.63□□□□□ -0.23
CPEB3Q8NE35 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 AC104794.3-201ENST00000566840 1248 ntBASIC13.63□□□□□ -0.23
CPEB3Q8NE35 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.63□□□□□ -0.23
CPEB3Q8NE35 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.63□□□□□ -0.23
CPEB3Q8NE35 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.63□□□□□ -0.23
CPEB3Q8NE35 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.63□□□□□ -0.23
CPEB3Q8NE35 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 AC112693.3-201ENST00000624819 1983 ntBASIC13.63□□□□□ -0.23
CPEB3Q8NE35 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CPEB3Q8NE35 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms