Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AL160314.3-201ENST00000556041 767 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AC005324.6-201ENST00000587972 613 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AL450472.2-201ENST00000603663 1156 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AC051619.9-201ENST00000623237 597 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AL161773.1-201ENST00000624845 863 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 NAP1L6-202ENST00000641404 1222 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AL157791.1-201ENST00000553667 1699 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 TUBB8P8-201ENST00000458717 1058 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 ALG1L13P-202ENST00000519320 584 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 POU5F1P2-201ENST00000521750 823 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AC008805.1-201ENST00000590892 364 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AL132994.2-201ENST00000603120 687 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AL390961.4-201ENST00000623958 2535 ntBASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CCDC168Q8NDH2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 LRRC59-203ENST00000576448 1531 ntBASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 IGHV3-37-201ENST00000518544 340 ntBASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 RPL17P45-201ENST00000586289 509 ntBASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 CAP2P1-201ENST00000557743 1390 ntBASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 DNM1P51-201ENST00000558149 522 ntBASIC12.84□□□□□ -0.35
CCDC168Q8NDH2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms