Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAB42Q8N4Z0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC092850.2-201ENST00000623821 2697 ntBASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 GNAQP1-201ENST00000444815 1067 ntBASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AL589987.1-201ENST00000453380 819 ntBASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC000095.1-201ENST00000603208 874 ntBASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC093726.1-201ENST00000608064 963 ntBASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC084364.1-201ENST00000551967 1556 ntBASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
RAB42Q8N4Z0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 RN7SL399P-201ENST00000471648 279 ntBASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 FAM86LP-201ENST00000478302 853 ntBASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAB42Q8N4Z0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms