Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.54■□□□□ 0.08
APLFQ8IW19 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.54■□□□□ 0.08
APLFQ8IW19 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.54■□□□□ 0.08
APLFQ8IW19 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.54■□□□□ 0.08
APLFQ8IW19 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
APLFQ8IW19 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.54■□□□□ 0.08
APLFQ8IW19 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
APLFQ8IW19 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.54■□□□□ 0.08
APLFQ8IW19 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.54■□□□□ 0.08
APLFQ8IW19 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
APLFQ8IW19 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.53■□□□□ 0.08
APLFQ8IW19 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 AL021920.2-201ENST00000624828 1351 ntBASIC15.53■□□□□ 0.08
APLFQ8IW19 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.53■□□□□ 0.08
APLFQ8IW19 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 GAPDHP21-201ENST00000450301 1010 ntBASIC15.53■□□□□ 0.08
APLFQ8IW19 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.53■□□□□ 0.08
APLFQ8IW19 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.53■□□□□ 0.08
APLFQ8IW19 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
APLFQ8IW19 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.53■□□□□ 0.08
APLFQ8IW19 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
APLFQ8IW19 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
APLFQ8IW19 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 AC126335.2-201ENST00000623362 4637 ntBASIC15.53■□□□□ 0.08
APLFQ8IW19 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APLFQ8IW19 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.53■□□□□ 0.08
APLFQ8IW19 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
APLFQ8IW19 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
APLFQ8IW19 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.52■□□□□ 0.08
APLFQ8IW19 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.52■□□□□ 0.08
APLFQ8IW19 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 TCAF1P1-201ENST00000414990 2232 ntBASIC15.52■□□□□ 0.08
APLFQ8IW19 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
APLFQ8IW19 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
APLFQ8IW19 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.52■□□□□ 0.08
APLFQ8IW19 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.52■□□□□ 0.08
APLFQ8IW19 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
APLFQ8IW19 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms