Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AL731571.1-201ENST00000617058 5428 ntBASIC10.4□□□□□ -0.74
SCXQ7RTU7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC10.4□□□□□ -0.74
SCXQ7RTU7 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SCXQ7RTU7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
SCXQ7RTU7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC10.4□□□□□ -0.75
SCXQ7RTU7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.75
SCXQ7RTU7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC10.4□□□□□ -0.75
SCXQ7RTU7 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
SCXQ7RTU7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
SCXQ7RTU7 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 CETN4P-206ENST00000642099 2168 ntBASIC10.39□□□□□ -0.75
SCXQ7RTU7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.39□□□□□ -0.75
SCXQ7RTU7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 MRPS18AP1-201ENST00000414458 589 ntBASIC10.39□□□□□ -0.75
SCXQ7RTU7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AC098859.1-201ENST00000502915 1238 ntBASIC10.39□□□□□ -0.75
SCXQ7RTU7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AP002490.2-201ENST00000524791 560 ntBASIC10.39□□□□□ -0.75
SCXQ7RTU7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AC005225.4-201ENST00000557330 545 ntBASIC10.39□□□□□ -0.75
SCXQ7RTU7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
SCXQ7RTU7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SCXQ7RTU7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms