Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 TOMM22P5-201ENST00000416399 439 ntBASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 AC092580.3-201ENST00000430932 139 ntBASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 RN7SL618P-201ENST00000477850 296 ntBASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 AC015910.1-201ENST00000579400 975 ntBASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 AC074044.1-201ENST00000609673 707 ntBASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HIST2H3AQ71DI3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.71□□□□□ -0.22
HIST2H3AQ71DI3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AC015922.1-201ENST00000421102 1152 ntBASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 KRT18P64-201ENST00000434946 1219 ntBASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AC097493.3-201ENST00000509725 367 ntBASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 SDHAP3-202ENST00000515467 728 ntBASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AC027369.6-201ENST00000525520 931 ntBASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AL844908.2-201ENST00000609461 460 ntBASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AC093028.1-201ENST00000622998 982 ntBASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.7□□□□□ -0.22
HIST2H3AQ71DI3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HIST2H3AQ71DI3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms