Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 AD000864.1-201ENST00000624076 2295 ntBASIC12.65□□□□□ -0.38
VPS13CQ709C8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
VPS13CQ709C8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
VPS13CQ709C8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
VPS13CQ709C8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.65□□□□□ -0.39
VPS13CQ709C8 AL645937.2-201ENST00000396808 931 ntBASIC12.65□□□□□ -0.39
VPS13CQ709C8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.65□□□□□ -0.39
VPS13CQ709C8 EIF3FP3-201ENST00000434851 1086 ntBASIC12.65□□□□□ -0.39
VPS13CQ709C8 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.65□□□□□ -0.39
VPS13CQ709C8 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13CQ709C8 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.65□□□□□ -0.39
VPS13CQ709C8 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13CQ709C8 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.65□□□□□ -0.39
VPS13CQ709C8 AC009955.4-201ENST00000597192 544 ntBASIC12.65□□□□□ -0.39
VPS13CQ709C8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.65□□□□□ -0.39
VPS13CQ709C8 AL353770.1-201ENST00000614915 403 ntBASIC12.65□□□□□ -0.39
VPS13CQ709C8 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.39
VPS13CQ709C8 AL805961.1-201ENST00000642026 753 ntBASIC12.65□□□□□ -0.39
VPS13CQ709C8 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13CQ709C8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
VPS13CQ709C8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 TNRC18P3-201ENST00000441896 2691 ntBASIC12.64□□□□□ -0.39
VPS13CQ709C8 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 AC012044.1-201ENST00000603431 297 ntBASIC12.64□□□□□ -0.39
VPS13CQ709C8 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.64□□□□□ -0.39
VPS13CQ709C8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VPS13CQ709C8 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VPS13CQ709C8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 AC090616.6-203ENST00000579186 1945 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 AC005618.3-201ENST00000624928 458 ntBASIC12.63□□□□□ -0.39
VPS13CQ709C8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VPS13CQ709C8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VPS13CQ709C8 AL139008.1-201ENST00000437894 228 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms