Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 AC006449.6-201ENST00000612330 2296 ntBASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C9orf50Q5SZB4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 AC244394.1-201ENST00000435000 1665 ntBASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 AC136759.1-202ENST00000530858 2194 ntBASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 AL008718.2-201ENST00000609206 1313 ntBASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 AC026434.2-201ENST00000506094 1078 ntBASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 ALG1L6P-201ENST00000515248 758 ntBASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 DUX4L47-201ENST00000566374 394 ntBASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 AC073911.3-201ENST00000624401 631 ntBASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C9orf50Q5SZB4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 HLA-K-203ENST00000430151 1046 ntBASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 NDUFS6P1-201ENST00000485187 316 ntBASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 DGAT2L7P-201ENST00000602462 744 ntBASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 AC105137.3-201ENST00000617588 984 ntBASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C9orf50Q5SZB4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms