Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14□□□□□ -0.17
CCDC58Q4VC31 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14□□□□□ -0.17
CCDC58Q4VC31 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14□□□□□ -0.17
CCDC58Q4VC31 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 AC061975.2-201ENST00000581722 295 ntBASIC14□□□□□ -0.17
CCDC58Q4VC31 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14□□□□□ -0.17
CCDC58Q4VC31 AL121912.1-201ENST00000603683 238 ntBASIC14□□□□□ -0.17
CCDC58Q4VC31 AL445228.2-201ENST00000605589 952 ntBASIC14□□□□□ -0.17
CCDC58Q4VC31 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCDC58Q4VC31 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 FAM215A-202ENST00000632077 792 ntBASIC14□□□□□ -0.17
CCDC58Q4VC31 AC010507.1-201ENST00000633895 436 ntBASIC14□□□□□ -0.17
CCDC58Q4VC31 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CCDC58Q4VC31 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCDC58Q4VC31 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
CCDC58Q4VC31 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 AC018892.3-201ENST00000623986 2499 ntBASIC14□□□□□ -0.17
CCDC58Q4VC31 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CCDC58Q4VC31 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CCDC58Q4VC31 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14□□□□□ -0.17
CCDC58Q4VC31 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CCDC58Q4VC31 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 FGD5P1-202ENST00000614866 2498 ntBASIC13.99□□□□□ -0.17
CCDC58Q4VC31 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AC092910.1-201ENST00000482027 1129 ntBASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AC073389.1-201ENST00000595595 795 ntBASIC13.99□□□□□ -0.17
CCDC58Q4VC31 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CCDC58Q4VC31 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CCDC58Q4VC31 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms