Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH17Q12864 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH17Q12864 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH17Q12864 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 AC138969.3-201ENST00000546612 1459 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 AC138932.2-201ENST00000548268 1459 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 AC126755.4-201ENST00000549796 1459 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 KRT18P28-201ENST00000453838 1332 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH17Q12864 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH17Q12864 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDH17Q12864 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH17Q12864 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH17Q12864 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH17Q12864 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH17Q12864 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH17Q12864 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH17Q12864 MIR943-201ENST00000401286 94 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 METTL21AP1-201ENST00000438852 635 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH17Q12864 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 AC044860.1-202ENST00000559481 777 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH17Q12864 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH17Q12864 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.72■□□□□ 0.11
CDH17Q12864 AL590560.3-201ENST00000623350 461 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH17Q12864 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH17Q12864 AL121723.1-201ENST00000445194 1519 ntBASIC15.72■□□□□ 0.11
CDH17Q12864 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH17Q12864 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.72■□□□□ 0.11
CDH17Q12864 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH17Q12864 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH17Q12864 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH17Q12864 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH17Q12864 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH17Q12864 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH17Q12864 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH17Q12864 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH17Q12864 GHSR-202ENST00000427970 912 ntBASIC15.71■□□□□ 0.11
CDH17Q12864 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH17Q12864 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH17Q12864 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CDH17Q12864 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH17Q12864 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH17Q12864 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDH17Q12864 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH17Q12864 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH17Q12864 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDH17Q12864 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH17Q12864 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH17Q12864 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH17Q12864 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH17Q12864 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms