Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH11P55287 SLC25A39P2-201ENST00000537614 270 ntBASIC14.33□□□□□ -0.12
CDH11P55287 AC243562.2-201ENST00000561247 970 ntBASIC14.33□□□□□ -0.12
CDH11P55287 LINC01225-203ENST00000563550 1244 ntBASIC14.33□□□□□ -0.12
CDH11P55287 AC015911.4-201ENST00000588022 1070 ntBASIC14.33□□□□□ -0.12
CDH11P55287 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH11P55287 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CDH11P55287 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH11P55287 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.33□□□□□ -0.12
CDH11P55287 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 AC007686.3-201ENST00000619017 3487 ntBASIC14.33□□□□□ -0.12
CDH11P55287 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH11P55287 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH11P55287 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH11P55287 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDH11P55287 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH11P55287 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH11P55287 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CDH11P55287 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.32□□□□□ -0.12
CDH11P55287 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDH11P55287 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH11P55287 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CDH11P55287 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 SPDYE7P-202ENST00000420373 878 ntBASIC14.32□□□□□ -0.12
CDH11P55287 FAM8A3P-201ENST00000427218 844 ntBASIC14.32□□□□□ -0.12
CDH11P55287 GPS2P2-201ENST00000430745 888 ntBASIC14.32□□□□□ -0.12
CDH11P55287 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 AL512356.2-201ENST00000546955 174 ntBASIC14.32□□□□□ -0.12
CDH11P55287 AP000842.3-202ENST00000569238 1080 ntBASIC14.32□□□□□ -0.12
CDH11P55287 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 AC092364.2-202ENST00000597012 1073 ntBASIC14.32□□□□□ -0.12
CDH11P55287 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH11P55287 MIR6080-201ENST00000617359 66 ntBASIC14.32□□□□□ -0.12
CDH11P55287 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 TUBB3P1-201ENST00000405796 1332 ntBASIC14.32□□□□□ -0.12
CDH11P55287 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDH11P55287 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH11P55287 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH11P55287 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH11P55287 AC026748.1-201ENST00000624349 3251 ntBASIC14.32□□□□□ -0.12
CDH11P55287 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH11P55287 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.31□□□□□ -0.12
CDH11P55287 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH11P55287 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
CDH11P55287 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms