Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.95□□□□□ -0.02
EPHA4P54764 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.95□□□□□ -0.02
EPHA4P54764 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
EPHA4P54764 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.95□□□□□ -0.02
EPHA4P54764 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.95□□□□□ -0.02
EPHA4P54764 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.95□□□□□ -0.02
EPHA4P54764 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
EPHA4P54764 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC14.95□□□□□ -0.02
EPHA4P54764 AL354718.3-201ENST00000616414 581 ntBASIC14.95□□□□□ -0.02
EPHA4P54764 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.95□□□□□ -0.02
EPHA4P54764 CR382287.1-201ENST00000623954 586 ntBASIC14.95□□□□□ -0.02
EPHA4P54764 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
EPHA4P54764 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.95□□□□□ -0.02
EPHA4P54764 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
EPHA4P54764 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
EPHA4P54764 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.95□□□□□ -0.02
EPHA4P54764 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
EPHA4P54764 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.94□□□□□ -0.02
EPHA4P54764 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.94□□□□□ -0.02
EPHA4P54764 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
EPHA4P54764 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
EPHA4P54764 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.94□□□□□ -0.02
EPHA4P54764 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
EPHA4P54764 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.94□□□□□ -0.02
EPHA4P54764 FTH1P14-201ENST00000482930 551 ntBASIC14.94□□□□□ -0.02
EPHA4P54764 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.94□□□□□ -0.02
EPHA4P54764 AC106760.1-201ENST00000508690 800 ntBASIC14.94□□□□□ -0.02
EPHA4P54764 AL645728.2-202ENST00000641679 227 ntBASIC14.94□□□□□ -0.02
EPHA4P54764 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 MSTO2P-201ENST00000314835 1709 ntBASIC14.94□□□□□ -0.02
EPHA4P54764 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.94□□□□□ -0.02
EPHA4P54764 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.94□□□□□ -0.02
EPHA4P54764 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
EPHA4P54764 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
EPHA4P54764 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.93□□□□□ -0.02
EPHA4P54764 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
EPHA4P54764 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.93□□□□□ -0.02
EPHA4P54764 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.93□□□□□ -0.02
EPHA4P54764 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.93□□□□□ -0.02
EPHA4P54764 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.93□□□□□ -0.02
EPHA4P54764 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.93□□□□□ -0.02
EPHA4P54764 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.93□□□□□ -0.02
EPHA4P54764 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.93□□□□□ -0.02
EPHA4P54764 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.93□□□□□ -0.02
EPHA4P54764 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.93□□□□□ -0.02
EPHA4P54764 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.93□□□□□ -0.02
EPHA4P54764 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.93□□□□□ -0.02
EPHA4P54764 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.93□□□□□ -0.02
EPHA4P54764 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
EPHA4P54764 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
EPHA4P54764 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.93□□□□□ -0.02
EPHA4P54764 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
EPHA4P54764 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.93□□□□□ -0.02
EPHA4P54764 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.93□□□□□ -0.02
EPHA4P54764 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms