Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC106760.1-201ENST00000508690 800 ntBASIC15.11■□□□□ 0.01
PDX1P52945 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.11■□□□□ 0.01
PDX1P52945 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 MIR6787-201ENST00000616675 61 ntBASIC15.11■□□□□ 0.01
PDX1P52945 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.11■□□□□ 0.01
PDX1P52945 AC005252.2-201ENST00000624630 1141 ntBASIC15.11■□□□□ 0.01
PDX1P52945 AP001282.1-201ENST00000531301 1499 ntBASIC15.11■□□□□ 0.01
PDX1P52945 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 REXO1L1P-202ENST00000608646 1974 ntBASIC15.11■□□□□ 0.01
PDX1P52945 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.11■□□□□ 0.01
PDX1P52945 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.11■□□□□ 0.01
PDX1P52945 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PDX1P52945 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.11■□□□□ 0.01
PDX1P52945 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PDX1P52945 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PDX1P52945 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.1■□□□□ 0.01
PDX1P52945 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.1■□□□□ 0.01
PDX1P52945 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.1■□□□□ 0.01
PDX1P52945 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.1■□□□□ 0.01
PDX1P52945 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.1■□□□□ 0.01
PDX1P52945 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.1■□□□□ 0.01
PDX1P52945 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.1■□□□□ 0.01
PDX1P52945 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.1■□□□□ 0.01
PDX1P52945 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.1■□□□□ 0.01
PDX1P52945 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.1■□□□□ 0.01
PDX1P52945 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.1■□□□□ 0.01
PDX1P52945 RN7SL219P-201ENST00000582872 296 ntBASIC15.1■□□□□ 0.01
PDX1P52945 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.1■□□□□ 0.01
PDX1P52945 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 MIR600HG-201ENST00000449175 5984 ntBASIC15.1■□□□□ 0.01
PDX1P52945 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PDX1P52945 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.1■□□□□ 0.01
PDX1P52945 AC105917.1-201ENST00000506637 2539 ntBASIC15.1■□□□□ 0.01
PDX1P52945 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PDX1P52945 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.1■□□□□ 0.01
PDX1P52945 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
PDX1P52945 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDX1P52945 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.1■□□□□ 0.01
PDX1P52945 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
PDX1P52945 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 AL133338.1-201ENST00000565695 1517 ntBASIC15.09■□□□□ 0.01
PDX1P52945 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.09■□□□□ 0.01
PDX1P52945 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.09■□□□□ 0.01
PDX1P52945 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDX1P52945 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms