Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC063926.3-201ENST00000624734 5658 ntBASIC14.17□□□□□ -0.14
HMGA2P52926 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.17□□□□□ -0.14
HMGA2P52926 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGA2P52926 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 YBX2P1-201ENST00000394192 760 ntBASIC14.17□□□□□ -0.14
HMGA2P52926 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 AC023274.1-201ENST00000418278 595 ntBASIC14.17□□□□□ -0.14
HMGA2P52926 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.17□□□□□ -0.14
HMGA2P52926 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 SLED1-202ENST00000512051 380 ntBASIC14.17□□□□□ -0.14
HMGA2P52926 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGA2P52926 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HMGA2P52926 RN7SL828P-201ENST00000607615 303 ntBASIC14.17□□□□□ -0.14
HMGA2P52926 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 AC097359.2-201ENST00000604992 2389 ntBASIC14.17□□□□□ -0.14
HMGA2P52926 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGA2P52926 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGA2P52926 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 AC041040.2-201ENST00000622926 2899 ntBASIC14.16□□□□□ -0.14
HMGA2P52926 AC006504.5-208ENST00000588784 2401 ntBASIC14.16□□□□□ -0.14
HMGA2P52926 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.16□□□□□ -0.14
HMGA2P52926 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.16□□□□□ -0.14
HMGA2P52926 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.16□□□□□ -0.14
HMGA2P52926 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 SLC25A1P1-201ENST00000528351 927 ntBASIC14.16□□□□□ -0.14
HMGA2P52926 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 AL035456.1-201ENST00000456064 1369 ntBASIC14.16□□□□□ -0.14
HMGA2P52926 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 AC138969.3-201ENST00000546612 1459 ntBASIC14.16□□□□□ -0.14
HMGA2P52926 AC138932.2-201ENST00000548268 1459 ntBASIC14.16□□□□□ -0.14
HMGA2P52926 AC126755.4-201ENST00000549796 1459 ntBASIC14.16□□□□□ -0.14
HMGA2P52926 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 AC007787.1-201ENST00000588095 1583 ntBASIC14.16□□□□□ -0.14
HMGA2P52926 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.16□□□□□ -0.14
HMGA2P52926 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGA2P52926 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGA2P52926 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
HMGA2P52926 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms