Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GPC3P51654 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.12■□□□□ 0.33
GPC3P51654 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GPC3P51654 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.12■□□□□ 0.33
GPC3P51654 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GPC3P51654 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GPC3P51654 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC3P51654 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
GPC3P51654 KRT223P-202ENST00000449164 1292 ntBASIC17.11■□□□□ 0.33
GPC3P51654 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
GPC3P51654 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
GPC3P51654 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.11■□□□□ 0.33
GPC3P51654 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.11■□□□□ 0.33
GPC3P51654 AC133552.6-201ENST00000613406 534 ntBASIC17.11■□□□□ 0.33
GPC3P51654 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC3P51654 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC3P51654 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 AC134312.5-201ENST00000568031 1313 ntBASIC17.11■□□□□ 0.33
GPC3P51654 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC3P51654 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.11■□□□□ 0.33
GPC3P51654 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GPC3P51654 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.11■□□□□ 0.33
GPC3P51654 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GPC3P51654 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GPC3P51654 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 AC092933.1-201ENST00000393644 945 ntBASIC17.1■□□□□ 0.33
GPC3P51654 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 AL355864.2-201ENST00000447420 863 ntBASIC17.1■□□□□ 0.33
GPC3P51654 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.1■□□□□ 0.33
GPC3P51654 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.1■□□□□ 0.33
GPC3P51654 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
GPC3P51654 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GPC3P51654 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.1■□□□□ 0.33
GPC3P51654 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GPC3P51654 AC092127.1-201ENST00000567093 3455 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms