Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TUBP50607 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TUBP50607 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TUBP50607 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TUBP50607 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TUBP50607 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 KRT18P43-201ENST00000469825 1281 ntBASIC16.41■□□□□ 0.22
TUBP50607 FAM86LP-201ENST00000478302 853 ntBASIC16.41■□□□□ 0.22
TUBP50607 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBP50607 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TUBP50607 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TUBP50607 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.41■□□□□ 0.22
TUBP50607 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBP50607 BRI3BPP1-201ENST00000594224 787 ntBASIC16.41■□□□□ 0.22
TUBP50607 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBP50607 WFDC1-204ENST00000613603 549 ntBASIC16.41■□□□□ 0.22
TUBP50607 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TUBP50607 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TUBP50607 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TUBP50607 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TUBP50607 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBP50607 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TUBP50607 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TUBP50607 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBP50607 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TUBP50607 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 AC073347.1-201ENST00000421633 2643 ntBASIC16.41■□□□□ 0.22
TUBP50607 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.41■□□□□ 0.22
TUBP50607 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.41■□□□□ 0.22
TUBP50607 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TUBP50607 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBP50607 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBP50607 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TUBP50607 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBP50607 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBP50607 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TUBP50607 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBP50607 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBP50607 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.4■□□□□ 0.22
TUBP50607 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBP50607 GIMAP3P-201ENST00000495150 836 ntBASIC16.4■□□□□ 0.22
TUBP50607 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBP50607 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBP50607 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.4■□□□□ 0.22
TUBP50607 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBP50607 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBP50607 IGHV3-72-202ENST00000621503 303 ntBASIC16.4■□□□□ 0.22
TUBP50607 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TUBP50607 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TUBP50607 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.4■□□□□ 0.22
TUBP50607 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.4■□□□□ 0.22
TUBP50607 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.4■□□□□ 0.22
TUBP50607 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TUBP50607 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TUBP50607 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.39■□□□□ 0.21
TUBP50607 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBP50607 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.39■□□□□ 0.21
TUBP50607 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 AP005117.1-202ENST00000581724 1908 ntBASIC16.39■□□□□ 0.21
TUBP50607 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBP50607 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TUBP50607 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.39■□□□□ 0.21
TUBP50607 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TUBP50607 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms