Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.45■□□□□ 0.22
BRCC3P46736 AL590640.2-201ENST00000457038 527 ntBASIC16.45■□□□□ 0.22
BRCC3P46736 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
BRCC3P46736 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.45■□□□□ 0.22
BRCC3P46736 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.45■□□□□ 0.22
BRCC3P46736 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.45■□□□□ 0.22
BRCC3P46736 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 MIR4538-201ENST00000581377 78 ntBASIC16.45■□□□□ 0.22
BRCC3P46736 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.45■□□□□ 0.22
BRCC3P46736 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.45■□□□□ 0.22
BRCC3P46736 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.45■□□□□ 0.22
BRCC3P46736 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
BRCC3P46736 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 AC105250.1-201ENST00000509378 2057 ntBASIC16.44■□□□□ 0.22
BRCC3P46736 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.44■□□□□ 0.22
BRCC3P46736 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BRCC3P46736 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BRCC3P46736 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BRCC3P46736 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
BRCC3P46736 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 ACTBP8-201ENST00000403258 1108 ntBASIC16.44■□□□□ 0.22
BRCC3P46736 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.44■□□□□ 0.22
BRCC3P46736 AC004066.1-201ENST00000502488 802 ntBASIC16.44■□□□□ 0.22
BRCC3P46736 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.44■□□□□ 0.22
BRCC3P46736 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.44■□□□□ 0.22
BRCC3P46736 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
BRCC3P46736 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.44■□□□□ 0.22
BRCC3P46736 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 AL158070.2-201ENST00000623713 1621 ntBASIC16.44■□□□□ 0.22
BRCC3P46736 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.44■□□□□ 0.22
BRCC3P46736 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BRCC3P46736 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.44■□□□□ 0.22
BRCC3P46736 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.44■□□□□ 0.22
BRCC3P46736 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
BRCC3P46736 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.43■□□□□ 0.22
BRCC3P46736 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
BRCC3P46736 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 MIR1908-201ENST00000410394 80 ntBASIC16.43■□□□□ 0.22
BRCC3P46736 FAM21FP-201ENST00000426241 1131 ntBASIC16.43■□□□□ 0.22
BRCC3P46736 AC114812.1-204ENST00000449669 728 ntBASIC16.43■□□□□ 0.22
BRCC3P46736 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 RNA5SP412-201ENST00000516234 123 ntBASIC16.43■□□□□ 0.22
BRCC3P46736 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.43■□□□□ 0.22
BRCC3P46736 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.43■□□□□ 0.22
BRCC3P46736 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BRCC3P46736 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms