Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RFC1P35251 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC1P35251 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RFC1P35251 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC1P35251 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RFC1P35251 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC1P35251 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 TOMM22P5-201ENST00000416399 439 ntBASIC16.42■□□□□ 0.22
RFC1P35251 PMS2P2-201ENST00000425039 1128 ntBASIC16.42■□□□□ 0.22
RFC1P35251 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.42■□□□□ 0.22
RFC1P35251 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.42■□□□□ 0.22
RFC1P35251 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 RFPL4AP1-201ENST00000530883 850 ntBASIC16.42■□□□□ 0.22
RFC1P35251 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC1P35251 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.42■□□□□ 0.22
RFC1P35251 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.42■□□□□ 0.22
RFC1P35251 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.42■□□□□ 0.22
RFC1P35251 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFC1P35251 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.42■□□□□ 0.22
RFC1P35251 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC1P35251 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.42■□□□□ 0.22
RFC1P35251 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC1P35251 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RFC1P35251 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.41■□□□□ 0.22
RFC1P35251 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.41■□□□□ 0.22
RFC1P35251 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.41■□□□□ 0.22
RFC1P35251 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.41■□□□□ 0.22
RFC1P35251 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC1P35251 AC004890.2-204ENST00000481968 304 ntBASIC16.41■□□□□ 0.22
RFC1P35251 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 AC004461.2-201ENST00000629517 803 ntBASIC16.41■□□□□ 0.22
RFC1P35251 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms