Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPS1P31327 CLUHP2-201ENST00000426660 1303 ntBASIC21.4■■□□□ 1.02
CPS1P31327 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPS1P31327 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC21.4■■□□□ 1.02
CPS1P31327 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPS1P31327 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.4■■□□□ 1.02
CPS1P31327 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC21.4■■□□□ 1.02
CPS1P31327 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPS1P31327 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPS1P31327 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21.4■■□□□ 1.02
CPS1P31327 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.4■■□□□ 1.02
CPS1P31327 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.4■■□□□ 1.02
CPS1P31327 NHP2-202ENST00000314397 599 ntTSL 2 BASIC21.39■■□□□ 1.02
CPS1P31327 RBM38-204ENST00000371219 760 ntTSL 2 BASIC21.39■■□□□ 1.02
CPS1P31327 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC21.39■■□□□ 1.02
CPS1P31327 HCG27-204ENST00000424675 895 ntTSL 3 BASIC21.39■■□□□ 1.02
CPS1P31327 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC21.39■■□□□ 1.02
CPS1P31327 FAM58BP-201ENST00000439056 645 ntBASIC21.39■■□□□ 1.02
CPS1P31327 CHCHD2P9-201ENST00000461726 456 ntBASIC21.39■■□□□ 1.02
CPS1P31327 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC21.39■■□□□ 1.02
CPS1P31327 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CPS1P31327 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CPS1P31327 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CPS1P31327 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CPS1P31327 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CPS1P31327 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPS1P31327 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC21.39■■□□□ 1.01
CPS1P31327 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC21.39■■□□□ 1.01
CPS1P31327 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CPS1P31327 AC090502.4-201ENST00000551714 1386 ntBASIC21.39■■□□□ 1.01
CPS1P31327 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPS1P31327 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CPS1P31327 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPS1P31327 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPS1P31327 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPS1P31327 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPS1P31327 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPS1P31327 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC21.39■■□□□ 1.01
CPS1P31327 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CPS1P31327 HKR1-225ENST00000592168 566 ntTSL 4 BASIC21.39■■□□□ 1.01
CPS1P31327 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CPS1P31327 AC005618.3-201ENST00000624928 458 ntBASIC21.39■■□□□ 1.01
CPS1P31327 AMT-204ENST00000427987 1646 ntTSL 5 BASIC21.39■■□□□ 1.01
CPS1P31327 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
CPS1P31327 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CPS1P31327 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CPS1P31327 AC055811.4-201ENST00000624039 1754 ntBASIC21.38■■□□□ 1.01
CPS1P31327 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC21.38■■□□□ 1.01
CPS1P31327 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CPS1P31327 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 AL357563.1-201ENST00000404728 395 ntBASIC21.38■■□□□ 1.01
CPS1P31327 RN7SKP175-201ENST00000408472 289 ntBASIC21.38■■□□□ 1.01
CPS1P31327 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CPS1P31327 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC21.38■■□□□ 1.01
CPS1P31327 ACTBP7-201ENST00000418351 1124 ntBASIC21.38■■□□□ 1.01
CPS1P31327 SCARNA21-201ENST00000517026 139 ntBASIC21.38■■□□□ 1.01
CPS1P31327 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC21.38■■□□□ 1.01
CPS1P31327 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 AC092299.1-201ENST00000632679 757 ntBASIC21.38■■□□□ 1.01
CPS1P31327 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.38■■□□□ 1.01
CPS1P31327 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC21.38■■□□□ 1.01
CPS1P31327 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 AC092364.2-201ENST00000596710 2692 ntBASIC21.38■■□□□ 1.01
CPS1P31327 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPS1P31327 PCDHA12-202ENST00000613593 2588 ntBASIC21.37■■□□□ 1.01
CPS1P31327 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.37■■□□□ 1.01
CPS1P31327 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 KRT8P21-201ENST00000430398 1491 ntBASIC21.37■■□□□ 1.01
CPS1P31327 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 AC010141.1-201ENST00000411585 623 ntBASIC21.37■■□□□ 1.01
CPS1P31327 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC21.37■■□□□ 1.01
CPS1P31327 AC024293.1-201ENST00000467930 498 ntBASIC21.37■■□□□ 1.01
CPS1P31327 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC21.37■■□□□ 1.01
CPS1P31327 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC21.37■■□□□ 1.01
CPS1P31327 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC21.37■■□□□ 1.01
CPS1P31327 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPS1P31327 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CPS1P31327 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC21.37■■□□□ 1.01
CPS1P31327 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.37■■□□□ 1.01
CPS1P31327 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.37■■□□□ 1.01
CPS1P31327 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.37■■□□□ 1.01
CPS1P31327 AP000593.2-201ENST00000542775 1433 ntBASIC21.36■■□□□ 1.01
CPS1P31327 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPS1P31327 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPS1P31327 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPS1P31327 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPS1P31327 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms