Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL4A5P29400 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL4A5P29400 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL4A5P29400 AL360270.3-201ENST00000609118 1348 ntBASIC18.18■□□□□ 0.5
COL4A5P29400 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A5P29400 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A5P29400 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COL4A5P29400 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A5P29400 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL4A5P29400 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL4A5P29400 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.18■□□□□ 0.5
COL4A5P29400 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
COL4A5P29400 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.18■□□□□ 0.5
COL4A5P29400 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A5P29400 RPL8P2-201ENST00000430538 502 ntBASIC18.18■□□□□ 0.5
COL4A5P29400 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.18■□□□□ 0.5
COL4A5P29400 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC18.18■□□□□ 0.5
COL4A5P29400 MIR4649-201ENST00000582839 64 ntBASIC18.18■□□□□ 0.5
COL4A5P29400 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A5P29400 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL4A5P29400 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A5P29400 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A5P29400 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.18■□□□□ 0.5
COL4A5P29400 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.18■□□□□ 0.5
COL4A5P29400 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL4A5P29400 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.17■□□□□ 0.5
COL4A5P29400 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 AL137783.1-201ENST00000623494 1896 ntBASIC18.17■□□□□ 0.5
COL4A5P29400 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.17■□□□□ 0.5
COL4A5P29400 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 PCDH8P1-201ENST00000428983 2773 ntBASIC18.17■□□□□ 0.5
COL4A5P29400 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 RPS9P1-201ENST00000419943 583 ntBASIC18.17■□□□□ 0.5
COL4A5P29400 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 TMCO5B-205ENST00000530020 894 ntBASIC18.17■□□□□ 0.5
COL4A5P29400 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 RBM8B-201ENST00000555532 525 ntBASIC18.17■□□□□ 0.5
COL4A5P29400 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC18.17■□□□□ 0.5
COL4A5P29400 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.17■□□□□ 0.5
COL4A5P29400 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.17■□□□□ 0.5
COL4A5P29400 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 AC024909.3-201ENST00000611513 2257 ntBASIC18.17■□□□□ 0.5
COL4A5P29400 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.17■□□□□ 0.5
COL4A5P29400 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC18.17■□□□□ 0.5
COL4A5P29400 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL4A5P29400 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
COL4A5P29400 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 AC006058.4-201ENST00000624016 1670 ntBASIC18.16■□□□□ 0.5
COL4A5P29400 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.16■□□□□ 0.5
COL4A5P29400 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.16■□□□□ 0.5
COL4A5P29400 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL4A5P29400 AC239868.1-201ENST00000369385 493 ntBASIC18.16■□□□□ 0.5
COL4A5P29400 AL627231.1-201ENST00000394467 1125 ntBASIC18.16■□□□□ 0.5
COL4A5P29400 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.16■□□□□ 0.5
COL4A5P29400 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.16■□□□□ 0.5
COL4A5P29400 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.16■□□□□ 0.5
COL4A5P29400 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.16■□□□□ 0.5
COL4A5P29400 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
COL4A5P29400 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.16■□□□□ 0.5
COL4A5P29400 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.16■□□□□ 0.5
COL4A5P29400 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.16■□□□□ 0.5
COL4A5P29400 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL4A5P29400 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.15■□□□□ 0.5
COL4A5P29400 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 AL512430.1-201ENST00000392575 860 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 AC097065.1-201ENST00000425737 517 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 DNM1P30-201ENST00000563586 452 ntBASIC18.15■□□□□ 0.5
COL4A5P29400 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL4A5P29400 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.15■□□□□ 0.5
COL4A5P29400 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms