Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 AF274858.1-201ENST00000406288 372 ntBASIC19.81■□□□□ 0.76
RXRBP28702 MIR1301-201ENST00000408518 82 ntBASIC19.81■□□□□ 0.76
RXRBP28702 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RXRBP28702 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RXRBP28702 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.81■□□□□ 0.76
RXRBP28702 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC19.81■□□□□ 0.76
RXRBP28702 MED11-202ENST00000573708 802 ntTSL 2 BASIC19.81■□□□□ 0.76
RXRBP28702 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRBP28702 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC19.81■□□□□ 0.76
RXRBP28702 MIR6720-201ENST00000611664 98 ntBASIC19.81■□□□□ 0.76
RXRBP28702 AC011462.4-201ENST00000616866 449 ntBASIC19.81■□□□□ 0.76
RXRBP28702 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 AC002044.2-201ENST00000624910 970 ntBASIC19.81■□□□□ 0.76
RXRBP28702 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.81■□□□□ 0.76
RXRBP28702 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRBP28702 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 INE2-201ENST00000630399 1874 ntBASIC19.81■□□□□ 0.76
RXRBP28702 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRBP28702 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RXRBP28702 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
RXRBP28702 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.81■□□□□ 0.76
RXRBP28702 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RXRBP28702 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.8■□□□□ 0.76
RXRBP28702 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.8■□□□□ 0.76
RXRBP28702 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RXRBP28702 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRBP28702 CTBP2P8-201ENST00000422584 1330 ntBASIC19.8■□□□□ 0.76
RXRBP28702 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RXRBP28702 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RXRBP28702 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RXRBP28702 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRBP28702 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRBP28702 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRBP28702 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC19.8■□□□□ 0.76
RXRBP28702 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.8■□□□□ 0.76
RXRBP28702 DUT-207ENST00000559416 635 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRBP28702 HERC2P11-201ENST00000562845 725 ntBASIC19.8■□□□□ 0.76
RXRBP28702 AC100756.2-201ENST00000569537 736 ntBASIC19.8■□□□□ 0.76
RXRBP28702 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.8■□□□□ 0.76
RXRBP28702 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC19.8■□□□□ 0.76
RXRBP28702 RN7SL121P-201ENST00000584223 273 ntBASIC19.8■□□□□ 0.76
RXRBP28702 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC19.8■□□□□ 0.76
RXRBP28702 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RXRBP28702 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RXRBP28702 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RXRBP28702 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RXRBP28702 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RXRBP28702 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.79■□□□□ 0.76
RXRBP28702 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 GUSBP10-201ENST00000417412 665 ntBASIC19.79■□□□□ 0.76
RXRBP28702 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC19.79■□□□□ 0.76
RXRBP28702 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC19.79■□□□□ 0.76
RXRBP28702 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC19.79■□□□□ 0.76
RXRBP28702 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.79■□□□□ 0.76
RXRBP28702 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.79■□□□□ 0.76
RXRBP28702 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
RXRBP28702 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.79■□□□□ 0.76
RXRBP28702 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RXRBP28702 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RXRBP28702 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms