Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 DRD5P1-201ENST00000456605 1438 ntBASIC14.09□□□□□ -0.15
GDF1P27539 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
GDF1P27539 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.09□□□□□ -0.15
GDF1P27539 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 AC234783.1-201ENST00000441761 496 ntBASIC14.09□□□□□ -0.15
GDF1P27539 AC026410.3-201ENST00000514280 936 ntBASIC14.09□□□□□ -0.15
GDF1P27539 KRT17P8-201ENST00000540749 863 ntBASIC14.09□□□□□ -0.15
GDF1P27539 HILS1-202ENST00000545329 423 ntBASIC14.09□□□□□ -0.15
GDF1P27539 PTP4A1P2-201ENST00000546033 454 ntBASIC14.09□□□□□ -0.15
GDF1P27539 RAB43P1-201ENST00000561790 589 ntBASIC14.09□□□□□ -0.15
GDF1P27539 MIR5189-201ENST00000577370 114 ntBASIC14.09□□□□□ -0.15
GDF1P27539 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.09□□□□□ -0.15
GDF1P27539 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.09□□□□□ -0.15
GDF1P27539 AC093813.1-201ENST00000605066 256 ntBASIC14.09□□□□□ -0.15
GDF1P27539 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.09□□□□□ -0.15
GDF1P27539 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.09□□□□□ -0.15
GDF1P27539 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.09□□□□□ -0.15
GDF1P27539 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GDF1P27539 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
GDF1P27539 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
GDF1P27539 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GDF1P27539 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
GDF1P27539 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GDF1P27539 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
GDF1P27539 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
GDF1P27539 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
GDF1P27539 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
GDF1P27539 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 ATP5G2P4-201ENST00000442175 420 ntBASIC14.08□□□□□ -0.16
GDF1P27539 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 IGHV3-71-201ENST00000523324 359 ntBASIC14.08□□□□□ -0.16
GDF1P27539 AP001582.1-201ENST00000525856 295 ntBASIC14.08□□□□□ -0.16
GDF1P27539 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.08□□□□□ -0.16
GDF1P27539 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.08□□□□□ -0.16
GDF1P27539 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 AL162274.1-201ENST00000617191 1098 ntBASIC14.08□□□□□ -0.16
GDF1P27539 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.08□□□□□ -0.16
GDF1P27539 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
GDF1P27539 AL365203.3-201ENST00000609742 2057 ntBASIC14.08□□□□□ -0.16
GDF1P27539 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
GDF1P27539 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
GDF1P27539 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms