Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
MMP11P24347 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
MMP11P24347 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP11P24347 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.78□□□□□ -0.04
MMP11P24347 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP11P24347 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MMP11P24347 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.77□□□□□ -0.04
MMP11P24347 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP11P24347 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MMP11P24347 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
MMP11P24347 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP11P24347 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP11P24347 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.77□□□□□ -0.04
MMP11P24347 AL109954.1-202ENST00000564051 2148 ntBASIC14.77□□□□□ -0.04
MMP11P24347 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP11P24347 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MMP11P24347 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.77□□□□□ -0.04
MMP11P24347 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
MMP11P24347 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 AL442647.2-201ENST00000429864 857 ntBASIC14.77□□□□□ -0.05
MMP11P24347 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.77□□□□□ -0.05
MMP11P24347 ATP5G2P4-201ENST00000442175 420 ntBASIC14.77□□□□□ -0.05
MMP11P24347 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 AC007389.4-201ENST00000454674 793 ntBASIC14.77□□□□□ -0.05
MMP11P24347 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.77□□□□□ -0.05
MMP11P24347 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.77□□□□□ -0.05
MMP11P24347 HNRNPUP1-201ENST00000554987 333 ntBASIC14.77□□□□□ -0.05
MMP11P24347 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.77□□□□□ -0.05
MMP11P24347 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.77□□□□□ -0.05
MMP11P24347 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.05
MMP11P24347 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
MMP11P24347 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.77□□□□□ -0.05
MMP11P24347 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.77□□□□□ -0.05
MMP11P24347 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
MMP11P24347 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
MMP11P24347 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.77□□□□□ -0.05
MMP11P24347 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP11P24347 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.76□□□□□ -0.05
MMP11P24347 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
MMP11P24347 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP11P24347 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
MMP11P24347 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.76□□□□□ -0.05
MMP11P24347 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP11P24347 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.76□□□□□ -0.05
MMP11P24347 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.76□□□□□ -0.05
MMP11P24347 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP11P24347 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.76□□□□□ -0.05
MMP11P24347 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP11P24347 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP11P24347 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
MMP11P24347 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.76□□□□□ -0.05
MMP11P24347 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
MMP11P24347 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms