Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP8P22894 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MMP8P22894 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MMP8P22894 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.31■□□□□ 0.2
MMP8P22894 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 REXO1L4P-201ENST00000605109 1937 ntBASIC16.31■□□□□ 0.2
MMP8P22894 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MMP8P22894 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.31■□□□□ 0.2
MMP8P22894 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MMP8P22894 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP8P22894 UGT1A2P-201ENST00000454886 866 ntBASIC16.31■□□□□ 0.2
MMP8P22894 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.31■□□□□ 0.2
MMP8P22894 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
MMP8P22894 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.31■□□□□ 0.2
MMP8P22894 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.31■□□□□ 0.2
MMP8P22894 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.31■□□□□ 0.2
MMP8P22894 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
MMP8P22894 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.31■□□□□ 0.2
MMP8P22894 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MMP8P22894 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP8P22894 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
MMP8P22894 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MMP8P22894 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.3■□□□□ 0.2
MMP8P22894 AC012508.2-201ENST00000567613 1472 ntBASIC16.3■□□□□ 0.2
MMP8P22894 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
MMP8P22894 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP8P22894 TPRX2P-201ENST00000535362 881 ntBASIC16.3■□□□□ 0.2
MMP8P22894 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP8P22894 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP8P22894 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP8P22894 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP8P22894 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.3■□□□□ 0.2
MMP8P22894 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP8P22894 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
MMP8P22894 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP8P22894 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MMP8P22894 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP8P22894 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP8P22894 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP8P22894 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP8P22894 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP8P22894 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms