Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.03■□□□□ -0
CAPN3P20807 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.03■□□□□ -0
CAPN3P20807 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.03■□□□□ -0
CAPN3P20807 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CAPN3P20807 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.03■□□□□ -0
CAPN3P20807 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.03■□□□□ -0
CAPN3P20807 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.03■□□□□ -0
CAPN3P20807 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.03■□□□□ -0
CAPN3P20807 AC091812.2-201ENST00000619081 385 ntBASIC15.03■□□□□ -0
CAPN3P20807 AC008267.7-201ENST00000624570 1194 ntBASIC15.03■□□□□ -0
CAPN3P20807 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.03■□□□□ -0
CAPN3P20807 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.03■□□□□ -0
CAPN3P20807 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN3P20807 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN3P20807 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CAPN3P20807 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CAPN3P20807 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN3P20807 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.03■□□□□ -0
CAPN3P20807 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.03■□□□□ -0
CAPN3P20807 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CAPN3P20807 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CAPN3P20807 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.03■□□□□ -0
CAPN3P20807 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN3P20807 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN3P20807 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN3P20807 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN3P20807 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.02■□□□□ -0
CAPN3P20807 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 CICP14-201ENST00000629111 2732 ntBASIC15.02■□□□□ -0
CAPN3P20807 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CAPN3P20807 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.02■□□□□ -0
CAPN3P20807 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CAPN3P20807 AC140479.7-201ENST00000636301 2332 ntBASIC15.02■□□□□ -0
CAPN3P20807 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.02■□□□□ -0
CAPN3P20807 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.02■□□□□ -0
CAPN3P20807 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.02■□□□□ -0
CAPN3P20807 BASP1P1-201ENST00000430708 665 ntBASIC15.02■□□□□ -0
CAPN3P20807 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.02■□□□□ -0
CAPN3P20807 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.02■□□□□ -0
CAPN3P20807 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CAPN3P20807 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.02■□□□□ -0
CAPN3P20807 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.02■□□□□ -0
CAPN3P20807 AL135744.1-201ENST00000565098 629 ntBASIC15.02■□□□□ -0
CAPN3P20807 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.02■□□□□ -0
CAPN3P20807 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.02■□□□□ -0
CAPN3P20807 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.02■□□□□ -0
CAPN3P20807 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN3P20807 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.02□□□□□ -0.01
CAPN3P20807 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN3P20807 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.02□□□□□ -0.01
CAPN3P20807 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN3P20807 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN3P20807 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN3P20807 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.02□□□□□ -0.01
CAPN3P20807 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN3P20807 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN3P20807 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CAPN3P20807 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.02□□□□□ -0.01
CAPN3P20807 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN3P20807 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.02□□□□□ -0.01
CAPN3P20807 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN3P20807 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN3P20807 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN3P20807 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 AKAP8P1-201ENST00000434743 1349 ntBASIC15.01□□□□□ -0.01
CAPN3P20807 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN3P20807 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN3P20807 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.01□□□□□ -0.01
CAPN3P20807 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN3P20807 AL355306.1-201ENST00000415580 579 ntBASIC15.01□□□□□ -0.01
CAPN3P20807 GAPDHP21-201ENST00000450301 1010 ntBASIC15.01□□□□□ -0.01
CAPN3P20807 AL139010.1-201ENST00000454878 894 ntBASIC15.01□□□□□ -0.01
CAPN3P20807 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.01□□□□□ -0.01
CAPN3P20807 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms