Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD53P19397 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD53P19397 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CD53P19397 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.21□□□□□ -0.14
CD53P19397 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD53P19397 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD53P19397 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD53P19397 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CD53P19397 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CD53P19397 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CD53P19397 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CD53P19397 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.2□□□□□ -0.14
CD53P19397 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 AC142381.1-201ENST00000426099 345 ntBASIC14.2□□□□□ -0.14
CD53P19397 HLA-V-201ENST00000429037 534 ntBASIC14.2□□□□□ -0.14
CD53P19397 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD53P19397 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.2□□□□□ -0.14
CD53P19397 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.2□□□□□ -0.14
CD53P19397 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.2□□□□□ -0.14
CD53P19397 AC007967.4-201ENST00000614700 386 ntBASIC14.2□□□□□ -0.14
CD53P19397 AL138828.2-201ENST00000615812 383 ntBASIC14.2□□□□□ -0.14
CD53P19397 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CD53P19397 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CD53P19397 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD53P19397 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.2□□□□□ -0.14
CD53P19397 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.2□□□□□ -0.14
CD53P19397 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.2□□□□□ -0.14
CD53P19397 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CD53P19397 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.19□□□□□ -0.14
CD53P19397 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.19□□□□□ -0.14
CD53P19397 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 AP3S2-216ENST00000617003 1561 ntBASIC14.19□□□□□ -0.14
CD53P19397 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 CU639417.3-201ENST00000624240 1404 ntBASIC14.19□□□□□ -0.14
CD53P19397 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CD53P19397 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
CD53P19397 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.19□□□□□ -0.14
CD53P19397 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CD53P19397 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.19□□□□□ -0.14
CD53P19397 KRT17P7-201ENST00000451704 1104 ntBASIC14.19□□□□□ -0.14
CD53P19397 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 AC105233.2-201ENST00000523697 349 ntBASIC14.19□□□□□ -0.14
CD53P19397 AF228730.5-201ENST00000530288 346 ntBASIC14.19□□□□□ -0.14
CD53P19397 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.19□□□□□ -0.14
CD53P19397 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.19□□□□□ -0.14
CD53P19397 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.19□□□□□ -0.14
CD53P19397 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CD53P19397 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.19□□□□□ -0.14
CD53P19397 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CD53P19397 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms