Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
DEFA4P12838 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 AC243562.2-201ENST00000561247 970 ntBASIC12.73□□□□□ -0.37
DEFA4P12838 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.73□□□□□ -0.37
DEFA4P12838 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.73□□□□□ -0.37
DEFA4P12838 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.73□□□□□ -0.37
DEFA4P12838 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 AC073389.1-201ENST00000595595 795 ntBASIC12.73□□□□□ -0.37
DEFA4P12838 AC026120.1-201ENST00000611536 926 ntBASIC12.73□□□□□ -0.37
DEFA4P12838 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
DEFA4P12838 C20orf181-201ENST00000623918 480 ntBASIC12.73□□□□□ -0.37
DEFA4P12838 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 UXT-AS1-201ENST00000590504 1525 ntBASIC12.72□□□□□ -0.37
DEFA4P12838 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.72□□□□□ -0.37
DEFA4P12838 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.72□□□□□ -0.37
DEFA4P12838 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 MIR574-201ENST00000385209 96 ntBASIC12.72□□□□□ -0.37
DEFA4P12838 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.72□□□□□ -0.37
DEFA4P12838 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 MCCD1P2-201ENST00000423228 335 ntBASIC12.72□□□□□ -0.37
DEFA4P12838 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.72□□□□□ -0.37
DEFA4P12838 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.72□□□□□ -0.37
DEFA4P12838 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.72□□□□□ -0.37
DEFA4P12838 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.72□□□□□ -0.37
DEFA4P12838 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.72□□□□□ -0.37
DEFA4P12838 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.72□□□□□ -0.37
DEFA4P12838 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
DEFA4P12838 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.72□□□□□ -0.37
DEFA4P12838 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
DEFA4P12838 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms