Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.03□□□□□ -0.48
TRBV12-3P01733 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
TRBV12-3P01733 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.03□□□□□ -0.48
TRBV12-3P01733 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRBV12-3P01733 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
TRBV12-3P01733 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TRBV12-3P01733 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.03□□□□□ -0.48
TRBV12-3P01733 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
TRBV12-3P01733 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRBV12-3P01733 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV12-3P01733 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.02□□□□□ -0.48
TRBV12-3P01733 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV12-3P01733 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.02□□□□□ -0.48
TRBV12-3P01733 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV12-3P01733 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV12-3P01733 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV12-3P01733 CICP11-201ENST00000434745 2827 ntBASIC12.02□□□□□ -0.48
TRBV12-3P01733 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TRBV12-3P01733 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.02□□□□□ -0.48
TRBV12-3P01733 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.02□□□□□ -0.48
TRBV12-3P01733 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
TRBV12-3P01733 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.02□□□□□ -0.48
TRBV12-3P01733 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 PIN1P1-201ENST00000412108 996 ntBASIC12.02□□□□□ -0.49
TRBV12-3P01733 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 RN7SL399P-201ENST00000471648 279 ntBASIC12.02□□□□□ -0.49
TRBV12-3P01733 FAM86LP-201ENST00000478302 853 ntBASIC12.02□□□□□ -0.49
TRBV12-3P01733 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 WASH4P-201ENST00000564273 1246 ntBASIC12.02□□□□□ -0.49
TRBV12-3P01733 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 AC007431.3-201ENST00000623221 587 ntBASIC12.02□□□□□ -0.49
TRBV12-3P01733 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 AC138035.3-201ENST00000622706 2791 ntBASIC12.02□□□□□ -0.49
TRBV12-3P01733 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.02□□□□□ -0.49
TRBV12-3P01733 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRBV12-3P01733 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.01□□□□□ -0.49
TRBV12-3P01733 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.01□□□□□ -0.49
TRBV12-3P01733 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV12-3P01733 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.01□□□□□ -0.49
TRBV12-3P01733 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
TRBV12-3P01733 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV12-3P01733 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV12-3P01733 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV12-3P01733 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRBV12-3P01733 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.01□□□□□ -0.49
TRBV12-3P01733 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV12-3P01733 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRBV12-3P01733 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV12-3P01733 MST1L-201ENST00000442552 2185 ntBASIC12.01□□□□□ -0.49
TRBV12-3P01733 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRBV12-3P01733 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.01□□□□□ -0.49
TRBV12-3P01733 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms