Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NDUFS3O75489 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NDUFS3O75489 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NDUFS3O75489 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFS3O75489 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFS3O75489 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFS3O75489 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFS3O75489 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NDUFS3O75489 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.54■□□□□ 0.08
NDUFS3O75489 RPL13P2-201ENST00000440687 659 ntBASIC15.54■□□□□ 0.08
NDUFS3O75489 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.54■□□□□ 0.08
NDUFS3O75489 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.54■□□□□ 0.08
NDUFS3O75489 AC044860.1-202ENST00000559481 777 ntBASIC15.54■□□□□ 0.08
NDUFS3O75489 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.54■□□□□ 0.08
NDUFS3O75489 AL844908.2-201ENST00000609461 460 ntBASIC15.54■□□□□ 0.08
NDUFS3O75489 AC106028.4-201ENST00000614509 607 ntBASIC15.54■□□□□ 0.08
NDUFS3O75489 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFS3O75489 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NDUFS3O75489 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
NDUFS3O75489 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFS3O75489 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFS3O75489 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFS3O75489 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NDUFS3O75489 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFS3O75489 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NDUFS3O75489 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFS3O75489 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.53■□□□□ 0.08
NDUFS3O75489 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 AL596257.1-201ENST00000641463 2694 ntBASIC15.53■□□□□ 0.08
NDUFS3O75489 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.53■□□□□ 0.08
NDUFS3O75489 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.53■□□□□ 0.08
NDUFS3O75489 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NDUFS3O75489 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFS3O75489 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFS3O75489 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFS3O75489 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 TIMM17BP1-201ENST00000545713 516 ntBASIC15.53■□□□□ 0.08
NDUFS3O75489 AC015910.1-201ENST00000579400 975 ntBASIC15.53■□□□□ 0.08
NDUFS3O75489 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFS3O75489 AC093512.1-201ENST00000617969 520 ntBASIC15.53■□□□□ 0.08
NDUFS3O75489 AL390754.1-201ENST00000619088 582 ntBASIC15.53■□□□□ 0.08
NDUFS3O75489 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
NDUFS3O75489 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NDUFS3O75489 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.53■□□□□ 0.08
NDUFS3O75489 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NDUFS3O75489 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFS3O75489 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms