Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGR5O75473 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LGR5O75473 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 AC007787.1-201ENST00000588095 1583 ntBASIC17.19■□□□□ 0.34
LGR5O75473 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LGR5O75473 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
LGR5O75473 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.19■□□□□ 0.34
LGR5O75473 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.19■□□□□ 0.34
LGR5O75473 AL645937.2-201ENST00000396808 931 ntBASIC17.19■□□□□ 0.34
LGR5O75473 RPL5P21-201ENST00000404620 815 ntBASIC17.19■□□□□ 0.34
LGR5O75473 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
LGR5O75473 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.19■□□□□ 0.34
LGR5O75473 AC026954.1-201ENST00000429771 1293 ntBASIC17.19■□□□□ 0.34
LGR5O75473 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.19■□□□□ 0.34
LGR5O75473 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.19■□□□□ 0.34
LGR5O75473 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.19■□□□□ 0.34
LGR5O75473 AC099548.2-209ENST00000480264 625 ntBASIC17.19■□□□□ 0.34
LGR5O75473 AC004066.1-201ENST00000502488 802 ntBASIC17.19■□□□□ 0.34
LGR5O75473 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
LGR5O75473 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.19■□□□□ 0.34
LGR5O75473 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LGR5O75473 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LGR5O75473 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
LGR5O75473 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LGR5O75473 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.18■□□□□ 0.34
LGR5O75473 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.18■□□□□ 0.34
LGR5O75473 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
LGR5O75473 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LGR5O75473 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 AC006001.1-201ENST00000325130 474 ntBASIC17.18■□□□□ 0.34
LGR5O75473 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.18■□□□□ 0.34
LGR5O75473 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.18■□□□□ 0.34
LGR5O75473 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LGR5O75473 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.18■□□□□ 0.34
LGR5O75473 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.18■□□□□ 0.34
LGR5O75473 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.18■□□□□ 0.34
LGR5O75473 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.18■□□□□ 0.34
LGR5O75473 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.18■□□□□ 0.34
LGR5O75473 AC132938.4-201ENST00000623835 848 ntBASIC17.18■□□□□ 0.34
LGR5O75473 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.18■□□□□ 0.34
LGR5O75473 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.18■□□□□ 0.34
LGR5O75473 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.18■□□□□ 0.34
LGR5O75473 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.18■□□□□ 0.34
LGR5O75473 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.18■□□□□ 0.34
LGR5O75473 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.18■□□□□ 0.34
LGR5O75473 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LGR5O75473 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.18■□□□□ 0.34
LGR5O75473 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 AC148477.4-201ENST00000613430 1793 ntBASIC17.17■□□□□ 0.34
LGR5O75473 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 AL365203.3-201ENST00000609742 2057 ntBASIC17.17■□□□□ 0.34
LGR5O75473 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.17■□□□□ 0.34
LGR5O75473 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 AC104457.1-201ENST00000401024 814 ntBASIC17.17■□□□□ 0.34
LGR5O75473 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.17■□□□□ 0.34
LGR5O75473 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LGR5O75473 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.17■□□□□ 0.34
LGR5O75473 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.17■□□□□ 0.34
LGR5O75473 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.17■□□□□ 0.34
LGR5O75473 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
LGR5O75473 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.17■□□□□ 0.34
LGR5O75473 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.17■□□□□ 0.34
LGR5O75473 AC009542.2-202ENST00000619004 1067 ntBASIC17.17■□□□□ 0.34
LGR5O75473 AC008687.7-202ENST00000637404 953 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms