Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF40O75150 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF40O75150 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RNF40O75150 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF40O75150 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RNF40O75150 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 AC091951.1-201ENST00000512854 2465 ntBASIC16.89■□□□□ 0.29
RNF40O75150 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF40O75150 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF40O75150 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF40O75150 MIR4492-201ENST00000581627 80 ntBASIC16.89■□□□□ 0.29
RNF40O75150 SPDYE22P-201ENST00000582158 798 ntBASIC16.89■□□□□ 0.29
RNF40O75150 AC073389.1-201ENST00000595595 795 ntBASIC16.89■□□□□ 0.29
RNF40O75150 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 AC004233.3-201ENST00000607794 1269 ntBASIC16.89■□□□□ 0.29
RNF40O75150 AL662799.1-202ENST00000614205 422 ntBASIC16.89■□□□□ 0.29
RNF40O75150 AC025048.6-201ENST00000634326 1161 ntBASIC16.89■□□□□ 0.29
RNF40O75150 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RNF40O75150 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF40O75150 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF40O75150 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 PCGF3-213ENST00000620529 1899 ntBASIC16.88■□□□□ 0.29
RNF40O75150 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF40O75150 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 AC005840.4-201ENST00000541242 2494 ntBASIC16.88■□□□□ 0.29
RNF40O75150 AC007686.3-201ENST00000619017 3487 ntBASIC16.88■□□□□ 0.29
RNF40O75150 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF40O75150 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF40O75150 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF40O75150 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF40O75150 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF40O75150 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RNF40O75150 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
RNF40O75150 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF40O75150 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF40O75150 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF40O75150 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF40O75150 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms