Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
ZIC3O60481 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 C18orf15-201ENST00000623680 2534 ntBASIC13.93□□□□□ -0.18
ZIC3O60481 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.93□□□□□ -0.18
ZIC3O60481 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
ZIC3O60481 AC104457.1-201ENST00000401024 814 ntBASIC13.93□□□□□ -0.18
ZIC3O60481 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.93□□□□□ -0.18
ZIC3O60481 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 U91328.1-201ENST00000437528 223 ntBASIC13.93□□□□□ -0.18
ZIC3O60481 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.93□□□□□ -0.18
ZIC3O60481 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC3O60481 USP32P1-208ENST00000506594 1164 ntBASIC13.93□□□□□ -0.18
ZIC3O60481 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC3O60481 BTNL10-201ENST00000595971 695 ntBASIC13.93□□□□□ -0.18
ZIC3O60481 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 BX539320.1-201ENST00000623759 877 ntBASIC13.93□□□□□ -0.18
ZIC3O60481 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC3O60481 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
ZIC3O60481 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.93□□□□□ -0.18
ZIC3O60481 MSTO2P-201ENST00000314835 1709 ntBASIC13.93□□□□□ -0.18
ZIC3O60481 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ZIC3O60481 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC3O60481 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 HYMAI-201ENST00000635591 3347 ntBASIC13.92□□□□□ -0.18
ZIC3O60481 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ZIC3O60481 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC3O60481 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ZIC3O60481 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ZIC3O60481 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 BAATP1-201ENST00000412284 1225 ntBASIC13.92□□□□□ -0.18
ZIC3O60481 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.92□□□□□ -0.18
ZIC3O60481 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC3O60481 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.92□□□□□ -0.18
ZIC3O60481 PTP4A1P2-201ENST00000546033 454 ntBASIC13.92□□□□□ -0.18
ZIC3O60481 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.92□□□□□ -0.18
ZIC3O60481 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.92□□□□□ -0.18
ZIC3O60481 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.92□□□□□ -0.18
ZIC3O60481 SAMD11P1-201ENST00000571429 661 ntBASIC13.92□□□□□ -0.18
ZIC3O60481 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.92□□□□□ -0.18
ZIC3O60481 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.92□□□□□ -0.18
ZIC3O60481 AP005019.2-201ENST00000615104 511 ntBASIC13.92□□□□□ -0.18
ZIC3O60481 PRSS30P-206ENST00000641773 873 ntBASIC13.92□□□□□ -0.18
ZIC3O60481 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.92□□□□□ -0.18
ZIC3O60481 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZIC3O60481 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ZIC3O60481 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZIC3O60481 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms