Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSI1O43347 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSI1O43347 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSI1O43347 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSI1O43347 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSI1O43347 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MSI1O43347 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MSI1O43347 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSI1O43347 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 TTTY23B-201ENST00000442790 549 ntBASIC16.12■□□□□ 0.17
MSI1O43347 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.12■□□□□ 0.17
MSI1O43347 GIMAP3P-201ENST00000495150 836 ntBASIC16.12■□□□□ 0.17
MSI1O43347 GAPDHP40-201ENST00000505218 1006 ntBASIC16.12■□□□□ 0.17
MSI1O43347 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.12■□□□□ 0.17
MSI1O43347 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.12■□□□□ 0.17
MSI1O43347 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 AC010319.3-201ENST00000597028 470 ntBASIC16.12■□□□□ 0.17
MSI1O43347 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.12■□□□□ 0.17
MSI1O43347 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MSI1O43347 AC087481.3-201ENST00000602886 1894 ntBASIC16.12■□□□□ 0.17
MSI1O43347 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MSI1O43347 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 AL162726.2-201ENST00000438986 1017 ntBASIC16.11■□□□□ 0.17
MSI1O43347 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.11■□□□□ 0.17
MSI1O43347 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.11■□□□□ 0.17
MSI1O43347 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.11■□□□□ 0.17
MSI1O43347 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.11■□□□□ 0.17
MSI1O43347 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.11■□□□□ 0.17
MSI1O43347 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 SSR4P1-203ENST00000599569 2260 ntBASIC16.11■□□□□ 0.17
MSI1O43347 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.11■□□□□ 0.17
MSI1O43347 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSI1O43347 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MSI1O43347 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
MSI1O43347 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.1■□□□□ 0.17
MSI1O43347 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSI1O43347 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms