Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TSPAN4O14817 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TSPAN4O14817 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TSPAN4O14817 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TSPAN4O14817 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.21□□□□□ -0.3
TSPAN4O14817 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.21□□□□□ -0.3
TSPAN4O14817 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TSPAN4O14817 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.21□□□□□ -0.3
TSPAN4O14817 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TSPAN4O14817 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.3
TSPAN4O14817 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TSPAN4O14817 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TSPAN4O14817 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.21□□□□□ -0.3
TSPAN4O14817 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TSPAN4O14817 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TSPAN4O14817 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TSPAN4O14817 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TSPAN4O14817 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TSPAN4O14817 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
TSPAN4O14817 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TSPAN4O14817 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TSPAN4O14817 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.2□□□□□ -0.3
TSPAN4O14817 FGD5P1-202ENST00000614866 2498 ntBASIC13.2□□□□□ -0.3
TSPAN4O14817 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TSPAN4O14817 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 AC003669.1-201ENST00000334569 611 ntBASIC13.2□□□□□ -0.3
TSPAN4O14817 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TSPAN4O14817 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.2□□□□□ -0.3
TSPAN4O14817 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.2□□□□□ -0.3
TSPAN4O14817 SAPCD2P3-201ENST00000455031 850 ntBASIC13.2□□□□□ -0.3
TSPAN4O14817 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.2□□□□□ -0.3
TSPAN4O14817 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.2□□□□□ -0.3
TSPAN4O14817 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 KRT8P10-201ENST00000450021 1447 ntBASIC13.2□□□□□ -0.3
TSPAN4O14817 AP005117.1-201ENST00000584346 1413 ntBASIC13.2□□□□□ -0.3
TSPAN4O14817 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TSPAN4O14817 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.2□□□□□ -0.3
TSPAN4O14817 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.2□□□□□ -0.3
TSPAN4O14817 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TSPAN4O14817 PMPCAP1-201ENST00000508114 1576 ntBASIC13.2□□□□□ -0.3
TSPAN4O14817 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.19□□□□□ -0.3
TSPAN4O14817 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TSPAN4O14817 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.19□□□□□ -0.3
TSPAN4O14817 GGT4P-201ENST00000623672 1708 ntBASIC13.19□□□□□ -0.3
TSPAN4O14817 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.19□□□□□ -0.3
TSPAN4O14817 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.19□□□□□ -0.3
TSPAN4O14817 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.19□□□□□ -0.3
TSPAN4O14817 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.19□□□□□ -0.3
TSPAN4O14817 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TSPAN4O14817 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TSPAN4O14817 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.19□□□□□ -0.3
TSPAN4O14817 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TSPAN4O14817 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.19□□□□□ -0.3
TSPAN4O14817 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.19□□□□□ -0.3
TSPAN4O14817 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms