Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC28A1O00337 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC28A1O00337 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC28A1O00337 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC28A1O00337 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 FAM8A3P-201ENST00000427218 844 ntBASIC15.01□□□□□ -0.01
SLC28A1O00337 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC28A1O00337 AC023141.5-201ENST00000458585 616 ntBASIC15.01□□□□□ -0.01
SLC28A1O00337 SERBP1P3-201ENST00000459980 809 ntBASIC15.01□□□□□ -0.01
SLC28A1O00337 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC28A1O00337 SLED1-202ENST00000512051 380 ntBASIC15.01□□□□□ -0.01
SLC28A1O00337 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC28A1O00337 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC28A1O00337 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC28A1O00337 AL589739.1-201ENST00000607720 493 ntBASIC15.01□□□□□ -0.01
SLC28A1O00337 AP001059.3-201ENST00000619053 235 ntBASIC15.01□□□□□ -0.01
SLC28A1O00337 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC28A1O00337 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC28A1O00337 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC28A1O00337 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 CETN4P-206ENST00000642099 2168 ntBASIC15.01□□□□□ -0.01
SLC28A1O00337 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC28A1O00337 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 FGD5P1-202ENST00000614866 2498 ntBASIC15.01□□□□□ -0.01
SLC28A1O00337 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC28A1O00337 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC28A1O00337 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15□□□□□ -0.01
SLC28A1O00337 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
SLC28A1O00337 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SLC28A1O00337 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15□□□□□ -0.01
SLC28A1O00337 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SLC28A1O00337 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SLC28A1O00337 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15□□□□□ -0.01
SLC28A1O00337 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC28A1O00337 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15□□□□□ -0.01
SLC28A1O00337 COX10-202ENST00000429152 875 ntTSL 2 BASIC15□□□□□ -0.01
SLC28A1O00337 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15□□□□□ -0.01
SLC28A1O00337 AC112482.1-201ENST00000492080 688 ntBASIC15□□□□□ -0.01
SLC28A1O00337 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15□□□□□ -0.01
SLC28A1O00337 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15□□□□□ -0.01
SLC28A1O00337 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15□□□□□ -0.01
SLC28A1O00337 AC015910.1-201ENST00000579400 975 ntBASIC15□□□□□ -0.01
SLC28A1O00337 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15□□□□□ -0.01
SLC28A1O00337 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15□□□□□ -0.01
SLC28A1O00337 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15□□□□□ -0.01
SLC28A1O00337 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
SLC28A1O00337 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SLC28A1O00337 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15□□□□□ -0.01
SLC28A1O00337 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15□□□□□ -0.01
SLC28A1O00337 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC28A1O00337 CICP11-201ENST00000434745 2827 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms