Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 RPL5P21-201ENST00000404620 815 ntBASIC12.55□□□□□ -0.4
SRRM4A7MD48 MIR1233-2-201ENST00000408138 82 ntBASIC12.55□□□□□ -0.4
SRRM4A7MD48 MIR1233-1-201ENST00000408722 82 ntBASIC12.55□□□□□ -0.4
SRRM4A7MD48 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 SLED1-202ENST00000512051 380 ntBASIC12.55□□□□□ -0.4
SRRM4A7MD48 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 AC004449.1-201ENST00000564240 433 ntBASIC12.55□□□□□ -0.4
SRRM4A7MD48 LINC01115-203ENST00000606068 577 ntBASIC12.55□□□□□ -0.4
SRRM4A7MD48 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SRRM4A7MD48 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.55□□□□□ -0.4
SRRM4A7MD48 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 RPL13P2-201ENST00000440687 659 ntBASIC12.54□□□□□ -0.4
SRRM4A7MD48 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 CNN2P2-201ENST00000443536 909 ntBASIC12.54□□□□□ -0.4
SRRM4A7MD48 CNN2P3-201ENST00000450201 906 ntBASIC12.54□□□□□ -0.4
SRRM4A7MD48 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 AL691403.2-201ENST00000618460 490 ntBASIC12.54□□□□□ -0.4
SRRM4A7MD48 AL136317.3-201ENST00000618497 906 ntBASIC12.54□□□□□ -0.4
SRRM4A7MD48 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 MROH4P-201ENST00000431302 1578 ntBASIC12.54□□□□□ -0.4
SRRM4A7MD48 CICP23-201ENST00000605013 2741 ntBASIC12.54□□□□□ -0.4
SRRM4A7MD48 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SRRM4A7MD48 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SRRM4A7MD48 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
SRRM4A7MD48 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SRRM4A7MD48 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms