Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 NFIC-211ENST00000641145 8399 ntBASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 CRYGEP-201ENST00000412192 528 ntBASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TCRBV3S1A0A5B6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 FAM220BP-201ENST00000377689 816 ntBASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 AZGP1P1-201ENST00000411909 902 ntBASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 TPT1P11-201ENST00000458482 498 ntBASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 AC012508.2-201ENST00000567613 1472 ntBASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 AC055811.4-201ENST00000624039 1754 ntBASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TCRBV3S1A0A5B6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.54□□□□□ -0.08
TCRBV3S1A0A5B6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms