Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 TUBB3P1-201ENST00000405796 1332 ntBASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HLA-DRB4X5D2U9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 AC018892.3-201ENST00000623986 2499 ntBASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 FAM86GP-201ENST00000448322 971 ntBASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.79□□□□□ -0.52
HLA-DRB4X5D2U9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 AZGP1P1-201ENST00000411909 902 ntBASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 KLF2P3-201ENST00000451977 1087 ntBASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 HLA-V-204ENST00000476601 1289 ntBASIC11.78□□□□□ -0.52
HLA-DRB4X5D2U9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms