Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AL049840.4-201ENST00000602422 811 ntBASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 TMEM261P1-201ENST00000604899 340 ntBASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AC025048.6-201ENST00000634326 1161 ntBASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AC068587.6-202ENST00000641839 5619 ntBASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 C18orf15-201ENST00000623680 2534 ntBASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AC112693.3-201ENST00000624819 1983 ntBASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 VDAC1P7-201ENST00000462417 847 ntBASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 AP005018.1-201ENST00000525475 301 ntBASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 NIFKP4-201ENST00000567275 1192 ntBASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 BRI3BPP1-201ENST00000594224 787 ntBASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 CICP11-201ENST00000434745 2827 ntBASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGC4Q9Y5F7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 AC013268.4-201ENST00000637413 2228 ntBASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 AL162727.3-201ENST00000635661 2787 ntBASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGC4Q9Y5F7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms